Bioconductor Fold change

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7.4k

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R deseq2 edger differential gene expression fold change

updated 3.5 years ago by ATpoint ★ 5.0k • written 7.4 years ago by Beginner ▴ 60

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3.1k

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diffBind Fold Change

updated 4.5 years ago by Joe Nicholas • 0 • written 6.8 years ago by joseluis.ruiz • 0

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1.9k

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edger differential expression genes fold change

updated 6.4 years ago by Aaron Lun ★ 29k • written 6.4 years ago by ilovesuperheroes1993 • 0

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1.5k

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mfuzz fold change log2 STANDARDISATION

7.4 years ago prakashpandey1111 • 0

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1.9k

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ballgown stattest fold change

updated 7.7 years ago by James W. MacDonald 68k • written 7.7 years ago by Arindam ▴ 80

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1.9k

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logfc limma fold change

updated 9.2 years ago by Gordon Smyth 53k • written 9.2 years ago by Claudia ▴ 10

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3.2k

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edgeR DE analysis fold change cpm

updated 9.3 years ago by Ryan C. Thompson ★ 7.9k • written 9.3 years ago by Sara ▴ 20

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Comment: Extract snp information from genomic regions with biomaRt -> "oaries_snp" by tomaamylikefood • 0

Using biomaRt to extract SNP information from genomic regions is as simple as setting the correct dataset in this case, and defining your …

Comment: Save the Date for EuroBioC2026 in Turku! by tomaamylikefood • 0

If you re interested in staying productive and entertained while following updates from events like EuroBioC2026, you can Download free And…

Answer: Error installing Seqinfo by fabio.marroni • 0

I am answering my own question. I found the solution thanks to [this post][1], and I am writing here the very simple procedure: 1) Instal…

Comment: Getting a large intercept with DESeq2 by Michael Love 43k

Thanks James -- Denise you can check the "note on factor levels" in the vignette. And I'd recommend `plotCounts()` for looking at individu…

Comment: Getting a large intercept with DESeq2 by James W. MacDonald 68k

As a trivial example, consider this: ``` > model.matrix(~Treatment, data.frame(Treatment = factor(rep(1:3, each = 4)))) (Intercept) Tre…

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Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors

Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors

Issues with downloading biomaRt - SeqInfo and S4 Vectors

Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors

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